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Autodock Vina Extended problem

Scheduled Pinned Locked Moved SAMSON Extensions
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  • S
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    Sherif 0
    wrote on last edited by
    #21

    why dont you add the possibility of adding kollman and gastegier charges like in autodock tools.
    so we can add H, charges, minimize the protien in the same application

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    • DmitriyMarinD
      DmitriyMarinD
      DmitriyMarin
      wrote on last edited by
      #22

      Dear @Sherif-0 ,

      Vina doesn't require and doesn't use assigned partial charges for atoms, quoting the Vina manual: "assigning atom charges is not needed", "AutoDock Vina ignores the user-supplied partial charges" (see http://vina.scripps.edu/manual.html). So there is no need in adding Kollman or Gasteiger charges.

      Dmitriy,
      The SAMSON Team, https://s-c.io

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      • S
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        Sherif 0
        wrote on last edited by
        #23

        Thanks this is very good to know

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