I have come to know Samson with fantastic features. I am facing some problem using your software. During Molecular Dynamics study, I can’t minimize my prepared protein-ligand complex. It shows some error message in minimization stage.
I want to dock my protein with ligand libraries, but the problem is I could not load my ligand library. Is there any specific ligand (library) format? I loaded ligand Library in .mol, .mol2, .pdb, .sdf, .pdbqt format. Would you help me to solve these problems?
Posts made by Rahad
Problem during minimization and molecular docking