there is problem in autodock. I don't understand what is this problem. even after selecting whole protein or very large search space this error is coming again and again.
kindly rectify this. thanks
Sorry for the issue. We'll look into it. Could you please use the Delegate editor (D) to deactivate all flexible bonds in the ligand and see what happens? You will find more information about this there: https://forum.samson-connect.net/topic/51/facing-problem-in-using-autodock-vina/2.
We have fixed the issue in the AutoDockVina SAMSON Element. Once you launch SAMSON, this Element will be automatically updated.
Thanks a lot. Now it is working in the advanced element of AutoDock (normal one I did not check)